Instructor Teaching Assistant
Eliezer Gurarie
egurarie (at) umd.edu
Department of Biology
University of Maryland
Silvia Alvarez
salvarez (at) umd.edu
Location: Ted Stevens Marine Research Institute
Large Conference Room (upstairs), Room 256
Times: Times: 8:30* - 5:00 (1 hour lunch - best to bring your own)
[* - EXCEPT Monday, 8/22, we start at 9:00 am].

Goals

This workshop is dedicated to developing skills in animal movement analysis. We will learn about the properties of movement data, ways to visualize and manipulate, some fundamental discrete and continuous time models of movement, tools for change point analyses, and relating movements to spatial data and environmental covariates.

What to bring

Bring data if you have some! And - even more ideally - some interesting ecological or behavioral questions you are interested in exploring. If you don’t have data that feels relevant, you can work with other participants on an in-class project.

We will be using R, which I assume most participants have expereince using. So have that installed, preferably a recent version. We’ll also use a bunch of useful packages which we can install and load as needed.

Bring enthusiasm!

And - if so inclined - snacks!

Structure

The course will mix lectures on concepts, theory and tools with practical labs using R. We will plan on covering 2 topics per day (morning and afternoon), with a lecture and an R lab each. We will also set aside time every day for participants to apply some of the techniques to their own data (alone or in groups) in a workshop-type atmosphere. We will culminate with some brief presentations of some of the analysis performed by individuals / groups.

The outline of the course below is approximate. I’ll be posting links to materials (lecture and labs) as the course proceeds.

Materials

Introductions / Overview:

Topic 1. Data loading and processing

Topic 2. Visualization and Mapping

Interlude on Movebank

  • discussion on consistent data organization, control, annotation and sharing

Topic 3. Complex numbers

Topic 4. Likelihoods

Topic 5. Movement models and parameters

Topic 6. Behavioral analysis

Topic 7. Environmental covariates

Grand Conclusion: Mega-mini symposium on Animal Movement